Beteiligt an Projekt/Förderung 3D-ADAM - Data Mining für die digitale KI-gestützte Identifikation und Prognose (strahlen)-therapeutischer Effekte Förderung Active-Learning in Machine-Learning-Projekten: Evaluation und Handlungsempfehlungen [FORZUG III] Förderung Dimensionsreduktion in Simulationsmodellen für die KI-getriebene Analyse von 3D-Sphäroiden zur Optimierung von Strahlentherapie in der Tumorbehandlung [Verbundprojekt Forzug II] Förderung Innovative Data-Science Methoden für die Systemmedizin: Assistenz bei der Analyse multizellulärer Gewebeorganisation Förderung Rissentstehung und -wachstum in Nietverbindungen unter Berücksichtigung stochastischer Größen (MatEnUm-2) Förderung Stochastische Vielteilchensysteme zur Analyse von Wachstums- und Verdrängungsprozessen Förderung
Gremientätigkeit Fachgruppe Stochastik der Deutschen Mathematiker-Vereinigung Komittee European Society of Mathematical and Theoretical Biology (ESMTB) Komittee
Publikation (Autor/in) 99512419202581 Wissenschaftlicher Artikel 99512419302581 Wissenschaftlicher Artikel 99512419402581 Wissenschaftlicher Artikel 99529319302581 Wissenschaftlicher Artikel 99532319402581 Wissenschaftlicher Artikel A dynamically diluted alignment model reveals the impact of cell turnover on the plasticity of tissue polarity patterns Wissenschaftlicher Artikel Amoeboid-mesenchymal migration plasticity promotes invasion only in complex heterogeneous microenvironments Wissenschaftlicher Artikel An Emerging Allee Effect Is Critical for Tumor Initiation and Persistence Wissenschaftlicher Artikel Analysis of Individual Cell Trajectories in Lattice-Gas Cellular Automaton Models for Migrating Cell Populations Wissenschaftlicher Artikel Cell adhesion heterogeneity reinforces tumour cell dissemination: novel insights from a mathematical model Wissenschaftlicher Artikel CellTrans: An R Package to Quantify Stochastic Cell State Transitions Vortrag CellTrans: An R Package to Quantify Stochastic Cell State Transitions Wissenschaftlicher Artikel Cellular Potts Models for Interacting Cell Populations: Mathematical Foundation, Challenges, and Future Prospects Kapitel Challenges in modeling interacting and migrating cell populations. Vortrag Efficient Radial-Shell Model for 3D Tumor Spheroid Dynamics with Radiotherapy Wissenschaftlicher Artikel Emerging Allee effect in tumor growth How Does a Single Cell Know When the Liver Has Reached Its Correct Size? Wissenschaftlicher Artikel Image segmentation of treated and untreated tumor spheroids by Fully Convolutional Networks Is cell segregation like oil and water: asymptotic versus transitory regime Wissenschaftlicher Artikel Migration plasticity increases tumor cell dissemination Vortrag Minimal cellular automaton model with heterogeneous cell sizes predicts epithelial colony growth Minimal cellular automaton model with heterogeneous cell sizes predicts epithelial colony growth Wissenschaftlicher Artikel Model-Based Evaluation of Spontaneous Tumor Regression in Pilocytic Astrocytoma Wissenschaftlicher Artikel Model-Based Prediction of an Effective Adhesion Parameter Guiding Multi-Type Cell Segregation Wissenschaftlicher Artikel Modeling age-specific incidence of colon cancer via niche competition Wissenschaftlicher Artikel Modeling collective cell motion: Are on- and off-lattice models equivalent? Wissenschaftlicher Artikel Multi-Scale Analysis of Contact-Dependent Interaction in Tissue Aggregation and Invasion Kapitel Multi-scale modeling in morphogenesis: a critical analysis of the cellular Potts model Wissenschaftlicher Artikel On the statistical power of Baarda's outlier test and some alternative. Wissenschaftlicher Artikel Patterns of Tumor Progression Predict Small and Tissue-Specific Tumor-Originating Niches Wissenschaftlicher Artikel Phenotypic plasticity in tumor growth and dissemination Vortrag Plasticity within Aldehyde Dehydrogenase-Positive Cells Determines Prostate Cancer Radiosensitivity Wissenschaftlicher Artikel Simulation sozioökonomischer Prozesse mit zellulären Automaten - räumliche Analyse des Kundenverhaltens konkurrierender Apotheken Konferenz-Paper Stem cell-associated heterogeneity in Glioblastoma results from intrinsic tumor plasticity shaped by the microenvironment Wissenschaftlicher Artikel Supporting data for "Image segmentation of treated and untreated tumor spheroids by Fully Convolutional Networks" The consequences of phenotypic plasticity on tumor growth and dissemination. Vortrag Vectorial active matter on the lattice: polar condensates and nematic filaments Wissenschaftlicher Artikel A Dynamically Diluted Alignment Model Reveals the Impact of Cell Turnover on the Plasticity of Tissue Polarity Patterns Vortrag Analyzing the impact of cell turnover on the plasticity of tissue polarity patterns by cellular automaton modeling: The dynamically diluted alignment model Vortrag Cellular automaton models for analyzing the collective migration of heterogeneous cell populations Vortrag Collective migration of heterogeneous cell populations Vortrag Data-driven quantification of stochastic cell state transitions in tumor cell lines Vortrag Dimension reduction in simulation models for the analysis of 3D spheroids for the optimization of radiotherapy in tumor treatment Vortrag Image segmentation of irradiated tumour spheroids by Fully Vortrag Image segmentation of irradiated tumour spheroids by Fully Convolutional Networks Vortrag Image segmentation of irradiated tumour spheroids by Fully Convolutional Networks Vortrag Image segmentation of treated and untreated tumor spheroids by Fully Convolutional Networks Wissenschaftlicher Artikel Impact of cell migration plasticity on tumor growth and invasion: A cell-based approach Vortrag Is cell segregation like oil and water: asymptotic versus transitory regime Vortrag Is cell segregation like oil and water: asymptotic versus transitory regime Vortrag Model-Based Prediction of an Effective Adhesion Parameter Guiding Multi-Type Cell Segregation Vortrag Model-Based Prediction of an Effective Adhesion Parameter Guiding Multi-Type Cell Segregation Vortrag Model-based prediction of an effective adhesion parameter guiding multi-type cell segregation Vortrag Model-driven inference of the cellular mechanisms in the early phase of tumor development Vortrag Modeling age-specific incidence of colon cancer via niche competition Vortrag Pancreatic cancer cell spheroid control probability assay (SCP) to assess the outcome of single-dose versus clinical-practice fractionated proton irradiation Vortrag Patterns of Tumor Progression Predict Small and Tissue-Specific Tumor-Originating Niches Vortrag
Betreute Dissertation Impact of cell migration plasticity on tumor growth and invasion: cellular automaton modelling, simulation and analysis. Amoeboid-mesenchymal migration plasticity promotes invasion only in complex heterogeneous microenvironments Abschlussarbeit Infering cellular mechanisms of tumor development from tissue-scale data: A Markov chain approach Abschlussarbeit
ausgewählte Veröffentlichungen dokument Emerging Allee effect in tumor growth Image segmentation of treated and untreated tumor spheroids by Fully Convolutional Networks Minimal cellular automaton model with heterogeneous cell sizes predicts epithelial colony growth Supporting data for "Image segmentation of treated and untreated tumor spheroids by Fully Convolutional Networks" kapitel Multi-Scale Analysis of Contact-Dependent Interaction in Tissue Aggregation and Invasion 2020 Cellular Potts Models for Interacting Cell Populations: Mathematical Foundation, Challenges, and Future Prospects 2018 wissenschaftlicher artikel Minimal cellular automaton model with heterogeneous cell sizes predicts epithelial colony growth. Journal of theoretical biology. 2024 Efficient Radial-Shell Model for 3D Tumor Spheroid Dynamics with Radiotherapy. Cancers. 15. 2023 Vectorial active matter on the lattice: polar condensates and nematic filaments. New journal of physics. 25. 2023 Is cell segregation like oil and water: asymptotic versus transitory regime. PLoS computational biology. 18. 2022 Modeling age-specific incidence of colon cancer via niche competition. PLoS computational biology. 18. 2022 Plasticity within Aldehyde Dehydrogenase-Positive Cells Determines Prostate Cancer Radiosensitivity. Molecular cancer research. 20. 2022 Model-Based Prediction of an Effective Adhesion Parameter Guiding Multi-Type Cell Segregation. Entropy (Basel, Switzerland). 23. 2021 Modeling collective cell motion: Are on- and off-lattice models equivalent?. Philosophical Transactions of the Royal Society B. 375. 2020 Patterns of Tumor Progression Predict Small and Tissue-Specific Tumor-Originating Niches. Frontiers in oncology. 8. 2019 Stem cell-associated heterogeneity in Glioblastoma results from intrinsic tumor plasticity shaped by the microenvironment. Nature communications. 10. 2019 A dynamically diluted alignment model reveals the impact of cell turnover on the plasticity of tissue polarity patterns. Journal of the Royal Society interface. 14. 2017 Amoeboid-mesenchymal migration plasticity promotes invasion only in complex heterogeneous microenvironments. Scientific reports. 7. 2017 Cell adhesion heterogeneity reinforces tumour cell dissemination: novel insights from a mathematical model. Biology direct. 12. 2017 CellTrans: An R Package to Quantify Stochastic Cell State Transitions. Bioinformatics and biology insights. 11. 2017 On the statistical power of Baarda's outlier test and some alternative.. Journal of geodetic science.. 7. 2017 An Emerging Allee Effect Is Critical for Tumor Initiation and Persistence. PLoS computational biology. 11. 2015 Analysis of Individual Cell Trajectories in Lattice-Gas Cellular Automaton Models for Migrating Cell Populations. Bulletin of mathematical biology. 77. 2015 Model-Based Evaluation of Spontaneous Tumor Regression in Pilocytic Astrocytoma. PLoS computational biology. 11. 2015 How Does a Single Cell Know When the Liver Has Reached Its Correct Size?. PLOS ONE. 9. 2014 Multi-scale modeling in morphogenesis: a critical analysis of the cellular Potts model. PLOS ONE. 7. 2012
Ausrichter des Events Minisymposium MS-13-AM-02 Cell-based models of tumor ecology and evolution SIMBA: Saxon Symposium on Informatics and Mathematics in Biological Applications Seminar Mathematics of tumor progression Seminar Theories of cell aggregation and invasion Seminar Trends and Methods in Mathematical Biology Seminar in Mathematical Biology: Mathematics of Collective Cell Migration Seminar in Mathematical Biology: Mathematics of tumor evolution and ecology Summer Solstice Conference on Discrete Models of Complex Systems 2019 Workshop Data-driven modeling for the analysis of multicellular tissue organisation,